Browsing by Author "Eldad Karamura"

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Evaluation of a lateral flow device for in-field detection of Banana Xanthomonas Wilt and its application in tracking the systemicity of Xanthomonas campestris pv. musacearum
(Afr. J. Agric. Res., 2016-06-13) Georgina Karamura; Dennis Ochola; Julian Smith; Jerome Kubiriba; Eldad Karamura
Early detection of Banana Xanthomonas Wilt (BXW) in the field and immediate destruction of infected plants or plant tissue are key control methods to prevent the introduction and spread of BXW. This requires rapid, cost-effective and an on- site diagnostic tool to detect the bacterium, Xanthomonas campestris pv musacearum (Xcm). Polymerase chain reaction (PCR) detection technique for BXW is efficient but requires expensive equipment and knowledgeable expertise; this limits PCR application to the laboratory. This study therefore was carried out to evaluate the enzyme-linked immunosorbent assay (ELISA) tool configured as a lateral flow device (LFD) for detection of Xcm. Studies on the systemicity of Xcm in banana were carried out using the BXW-LFD in a field trial of 300 banana plants of Pisang Awak inoculated with the Xcm at Kiifu Forest, Mukono District, Uganda. Pseudo-stem samples from symptomatic and asymptomatic suckers were collected and tested with the LFD and the results compared with conventional PCR using the GspDm BXW primers. The LFD was able to detect Xcm 3 days post inoculation (dpi), 2 cm above and below inoculation site, 15 to 35 days in the pseudo-stem, 35 to 42 days to reach the corm and 81 days in the lateral roots. The rate of Xcm movement in banana was found to be sigmoid in nature, leveling off as the bacteria moved down the pseudo-stem towards the corm. Conventional PCR was only 24% more sensitive than the LFD. The use of the BXW LFD can therefore boost BXW control measures through improved surveillance and quarantine services to arrest the introduction and spread of the disease within and between national borders.
Female Reproductive Potential and 3x by 2x Breeding Approach for Hybrid Seeds Development in Sukali Ndizi Genotype (Musa genome AAB)
(European Journal of Agriculture and Food Sciences, 2023-05-15) Henry Buregyeya; Naboth Oyesigye; Doreen Amumpiare; Priver B. Namanya; Kephas Nowakunda; Wilberforce K. Tushemereirwe; Eldad Karamura; Patrick Rubaihayo
Sukali Ndizi is one of the most popular local desert banana cultivars in Uganda. The crop is affected by a number of diseases and pests. Genetic improvement of the crop by hybridization may be hindered by very low seed set and poor seed germination. The main characteristics for assessing the female reproductive potential (seed set, seed quality and embryo germination of hybrid seeds) and 3x by 2x breeding approach were assessed in crosses of eleven different male diploid parents either wild or improved diploids with Sukali Ndizi landrace as the female parent for a period of 5 consecutive years planted in pollination blocks at National Agricultural Research Laboratories Kawanda (NARL). The month of pollination did not show any pattern throughout the pollination period but the crosses showed considerable variability in seed set, seed quality, and seed germination for different male diploids used. The water gravity test which differentiated the extracted seeds as sunken/viable and floating/nonviable seeds showed that a substantial amount of seed was floating and the sunken externally characterized by black hard integuments was only 39% with a range = 24%– 60% which contained embryos, of which 22% (range = 0–37%) germinated. The increase in non-viable seed suggested that ovule abortion in Sukali Ndizi which mainly involved embryo and endosperm abortions was the cause of limited seed germination and the paternity of the zygotes was a major factor underlying abortions. Flow cytometric analysis of nuclear DNA content was used to estimate ploidy levels of the progenies with results showing that using 3x by 2x breeding approach differing levels of ploidy were achieved [3x (288), 4x (61), 5x (14) and 2x (2)] signifying the predominance of 3x progenies and the presence of 5x and 4x conforming to the possibility of sexual polyploids. Although pollination of Sukali Ndizi can be done all around the year, the seed set both quantity and quality and germination were very poor, necessitating the development of an efficient regeneration protocol for zygotic embryos at varying maturity stages to increase the recovery of hybrids.
Ploidy level of the banana (Musa spp.) accessions at the germplasm collection centre for the East and Central Africa
(Afr. J. Biotechnol., 2016-08-21) Deborah Karamura; Robooni Tumuhimbise; Sedrach Muhangi; Moses Nyine; Micheal Pillay; Reuben Ssali Tendo; David Talengera; Priver Namanya; Jerome Kubiriba; Eldad Karamura
Banana Germplasm Collection serves as a source of useful genes for banana breeding. However, insufficient and/or inaccurate information on the ploidy level of the germplasm renders its utilization in breeding difficult. The objective of this study was to determine and validate the ploidy level of 120 banana accessions in the ex situ germplasm collection centre for the East and Central Africa, located in Mbarara, Uganda. Flow cytometric analysis of the nuclear DNA content was used to determine the ploidy level of the accessions. Results indicate that accessions: Bura, Diana, Kambani-Rungwe, Paji and Pagatau, and Rungwe that were previously classified as diploids are actually triploids, whereas Selangor previously known to be a diploid is a tetraploid. Accessions such as Galeo, Mwitupemba and Ntindi 1 that were previously classified as triploids were found diploids. GT, FHIA 25 and Muzungu Mwekundu that were considered as tetraploids, were found triploids. The information generated will guide correct placement of these accessions in the regional germplasm collection centre for the East and Central Africa and their utilization in banana breeding.